rs51730342 SNP Detail

Summary

• ID
  rs51730342
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:126680898 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TTGTTCTTTT CTAACCCGCA TTTGTTCTTT TTAAAGACTC
  ACTTGGCCCA CTTCACAGTT CGGATTAGGC AGGATTTCAG AGTCAACGTC TCCTCCTCCT
  W
  CTGCTCCTCC TCCTCATTTT TAAATATGGT TTTTCATTTT CTCCCGGGGA GGAATGTTCA
  GGAACAATAT GTACGCATCT GACCCAAAGG GGGGGGGGGG G                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss147726515	ENSMUSSNP718747	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs51730342					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:126680898 () rs orientation: forward

Symbol	Name	Function Class
Gm66841	predicted gene, 66841	890 bp upstream
Rr440688	regulatory region 440688	within coordinates
Rr440689	regulatory region 440689	128 bp distal
Rr440690	regulatory region 440690	400 bp proximal