rs51731321 SNP Detail

Summary

• ID
  rs51731321
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82983129 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACCC TTATCTATCG AGAATCAAAG
  Y
  GTGTTCTCCA CCGATAGATG CCACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148234840	ENSMUSSNP1096672	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss325035688	CHEV_15_82929358	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51731321					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82983129 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7437	CpG island 7437	923 bp proximal
Rr304679	regulatory region 304679	1929 bp distal
Rr310854	regulatory region 310854	1027 bp distal
Rr312184	regulatory region 312184	671 bp proximal
Rr404540	regulatory region 404540	1091 bp upstream
Serhl	serine hydrolase-like	1265 bp upstream
Tssr132408	transcription start site region 132408	1273 bp upstream
Tssr132409	transcription start site region 132409	1353 bp upstream
Tssr132410	transcription start site region 132410	1378 bp upstream