rs51743854 SNP Detail

Summary

• ID
  rs51743854
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:76041599 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTGCAGGT GCTTTTCCAC
  ATGATAAAGC TTTTATTCTG AGTGAATAAG AACAAGAAAC CCTGTCCTTT GAGGAGATGT
  CCACGGAGAC GAGCCACTGG CTGAACGTCG TACACACCTT TCATCCCAAC ACTCCAGATG
  CAGAGGCAGG CAGATCTCTA TGAGTTTGAA GTCAGCCTAG TCTACATAGT GAGTTCCAGG
  W
  CACCAGAGCT ATACAGCGAG GTAGACCCTG TCTTAAAACA AAACATCTAG CAATTGGCTC
  ACACTCCAAT GAGGCTCTAT CTTAAATAAG ACGCATCTTA AATTTGGTGT TCTCTCAGTC
  ACGTTGGGTC CCTTTTATCC CAGGAGTTGG GGACCCTCAG GACACCCTGC TGTGTCAGAC
  AGGGAGACAG AGTGGGGCTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148164921	ENSMUSSNP5163408	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51743854					SNP	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:76041599 () rs orientation: forward

Symbol	Name	Function Class
Gm62598	predicted gene, 62598	1319 bp upstream
Rr390932	regulatory region 390932	330 bp upstream