rs51746340 SNP Detail

Summary

• ID
  rs51746340
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:4369270 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATCACAGAA CAAACACCCA
  GACATCTGAG CTACCATCTT ATGTGCCCAT TTGCAGAGGA CTAGTGGCAG ACATGATAGT
  GATCTAGAAA GGAGGACATG AAAGTTAAGA AAGAAAAGTG ACTCAAAGAT AGCTCAGATT
  ACAAACCACC AAGGCAGGGA AAGTATGCAA ATGAAAACCA GCCTTGAGTC AAGGAAAATA
  Y
  CAGTCATCTA TACAACTCAG CTCTTAATGA TTCTTGAGAC GTGAAGGATT ACAGGGACAA
  AGCTTAAGAT AAATGTTCAA GGGTCCGGCA GCTCCAAGCA GCTAACACAG AGGAAGAACC
  ACTTGGACGA GCTCCCCACT TACCAGTCTT CCTCTCAGTC TATGCCACAT CTGTACATTT
  TGATGTTTGT TTGTTTATTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52704732	NES15547698	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51746340					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52704732	NES15547698	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:4369270 () rs orientation: forward

Symbol	Name	Function Class
Gm6773	predicted gene 6773	366 bp upstream