rs51750730 SNP Detail

Summary

• ID
  rs51750730
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:105534560 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATAAGTTA AGCATTTCAG
  GCTCCATTTC TGCAAACAAC ATCACAGAAA ATATAAGATT TTTAATAAAA ATCTTTAATA
  GGTTCAATTC TTGACTTTTC TACTTACATT TATCTTTTTG CTTAACTCAT GTAATGTTCA
  AAGAGATTTA CAGTTAAATT TAGTGACATA ATTCCATTTT CACGTAGAGA GAATAAAAGG
  C
  AAGAAGTGTG CGCATCTCTG AATAATGTTT AGCAAGAGTG TTAGAAGTAA TCTCACTCAG
  GCAGTATCAT AAAGTGCCTC CTAAACAAAA AGTGGTAAGA GAATACAATA GGAGTTGCCT
  GTCAGTTAAT TCTCGATGGA TCCAGTGGGT AACTGACCTG CTTGGAAATG ACCTTGAATG
  CTAGTGCTTT CAGATGTGGT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss146763418	ENSMUSSNP5627049	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs51750730					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:105534560 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ndfip2	Nedd4 family interacting protein 2			Intron
				Noncoding-Transcript-Variant
Rr404277	regulatory region 404277			642 bp downstream
Rr497187	regulatory region 497187			643 bp distal
Rr497188	regulatory region 497188			743 bp distal