rs51752623 SNP Detail

Summary

• ID
  rs51752623
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156034399 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTGACAGCT GCAGCTGCTG
  CTGTGGCTTG ACGTGTACCC TTGGGCTTGC TCATTTTCTA GTCCTGTTGC TGTTCAGGAC
  TCCCAATATC CTTCTTCCCC CCACCCCCAC CCCCAATATC CTTCTAATAA AGCTTCTTTT
  TGCTTATAGC CGCAACAGTG TCAATGCTTG TAATTATTAG TATTAGTATT ATCAGTTATC
  R
  TTAAATTTTT TTTTTTGAGA CAGGGTTTCT CTGTATAGCC CTGGATGTTG TTGTTATAAG
  TTCAAGCATT GTGGGGCAGT GGTGCACACC TTTAATCAAA GCACTTGGGA GGCACAGGCA
  CCACCCACCA AGGGCTGGAC TCTCCCTGAT TGATTACTAA CTGAGAACAG GCCTTACAGC
  TGGATCTCTT GGAGACATTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148068193	ENSMUSSNP1851247	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51752623					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156034399 () rs orientation: forward

Symbol	Name	Function Class
Gm75148	predicted gene, 75148	1573 bp downstream
Rr374121	regulatory region 374121	1988 bp upstream
Rr568205	regulatory region 568205	1458 bp distal
Rr568206	regulatory region 568206	960 bp distal
Rr568207	regulatory region 568207	747 bp distal