rs51758446 SNP Detail

Summary

• ID
  rs51758446
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:82578032 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAATTCCTT AGCTTGAAGA
  TTTTTTTCAC TAAGTATGCA AATTGAGGAA TGTGGAACTT CCTTTCCAGT CTGTGGCCCC
  AGTATAAGCT TCTGACCTGG ACAAATTTAT AGTGCTGAAA CATAAAGTGA CCTAGAAATC
  TAGCTAATCT TTTTAAGCAC TCATTTTTTC ACTGGGAAAG TCTAATTACT CAGATAAGTA
  Y
  GGCACTTGTT GCTTACTTTT AATGACTTGA AAATGAAAGA GACAGAAATT TATGGTGCTA
  GATATTTTTC ATGTTCTATA AAACTGGCTA TATCTTTTCA CAGCCCATTT GACTCTATTC
  CCTTTATCAG CAAATGAAAT GCAATATAAC GGTTCTTAAA ATTTCATACT ATCTTTCCTA
  TCATTTTTGG CCATAAAACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss63339927	NES17514622	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs51758446					SNP	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63339927	NES17514622	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:82578032 () rs orientation: forward

Symbol	Name	Function Class
Dmd	dystrophin, muscular dystrophy	within coordinates
Gm22580	predicted gene, 22580	1605 bp upstream