rs51761633 SNP Detail

Summary

• ID
  rs51761633
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:36726308 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GCTGTAAGAC TAAAATCGCC AGAGAAGGCC TTCCTTGGTG
  AAGCCCTCCA CCCCATGCCC ACATGTGAGT TCAGCTGGAC TGAGAGCCAG TCCCAACCTG
  T
  TCCAGACTCC ACTTCATCCT TCAAGCCTGG TGCCTGGACA CCCTGAGGGA GGAAACAGAG
  GACAGAGAAG CACTTCTGGC ACCCAACGCG GCCCACAGCT G                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147608100	ENSMUSSNP6791097	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51761633					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:36726308 () rs orientation: forward

Symbol	Name	Function Class
A830021M18Rik	RIKEN cDNA A830021M18 gene	178 bp upstream
Gm41297	predicted gene, 41297	within coordinates
Gm49263	predicted gene, 49263	828 bp downstream
Rr501052	regulatory region 501052	within coordinates
Rr501053	regulatory region 501053	877 bp proximal
Rr501054	regulatory region 501054	1761 bp proximal
Tssr131078	transcription start site region 131078	787 bp downstream
Tssr131079	transcription start site region 131079	256 bp upstream
Tssr131080	transcription start site region 131080	297 bp upstream
Tssr131081	transcription start site region 131081	328 bp upstream
Tssr131082	transcription start site region 131082	603 bp upstream
Tssr131083	transcription start site region 131083	796 bp upstream
Tssr131084	transcription start site region 131084	842 bp upstream