rs51763353 SNP Detail

Summary

• ID
  rs51763353
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:62397218 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTTA TGCTCAAGGA CGCAAGCCAC
  Y
  GCATTTTTTA GAATCTCTCC CCGAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	PWD/PhJ	SM/J
ss61408639	NES16791372	PERLEGEN	MM_PANEL2	f	SNP	C			C	T	T		T
ss136550926	ENSMUSSNP6419764	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C
ss322982745	CHEV_9_62337743	CHEVERUD	SCREENING_POP	f	SNP							T		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	PWD/PhJ	SM/J
rs51763353					SNP	C	C	C	C	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61408639	NES16791372	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:62397218 () rs orientation: forward

Symbol	Name	Function Class
Coro2b	coronin, actin binding protein, 2B	within coordinates
Cpgi21898	CpG island 21898	908 bp distal
Rr368794	regulatory region 368794	898 bp downstream