rs51764173 SNP Detail

Summary

• ID
  rs51764173
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:19190514 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACTA TGGAAGCTGC TGATGTCCTA
  T
  TCACAGTTAT CTTTGCCTCT CCACG                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148777418	ENSMUSSNP1349122	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss322523292	CHEV_8_19140498	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51764173					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:19190514 () rs orientation: forward

Symbol	Name	Function Class
Gm45826	predicted gene 45826	280 bp upstream
Spag11b	sperm associated antigen 11B	261 bp upstream
Tssr76531	transcription start site region 76531	253 bp upstream
Tssr76532	transcription start site region 76532	873 bp upstream
Tssr76533	transcription start site region 76533	931 bp upstream
Tssr76534	transcription start site region 76534	949 bp upstream
Tssr76535	transcription start site region 76535	984 bp upstream
Tssr80550	transcription start site region 80550	973 bp downstream