rs51765274 SNP Detail

Summary

• ID
  rs51765274
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:49362845 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GGAAGAAAGA GAACAAAAAA ATGGAGCAGA GACTGAAGGA
  AGGGCCATCC GGGAACTGCC CCACCTGGGG ATCCATCCTG TCTGCAGACA CCAAATCCTA
  C
  ACTGTTGCTG TGGTCAAGAG GCACTTGCTG ACAGGAACCT GGTATGAATG CTCCTTGGGA
  GGTCAGGCCA GCAACTGACC AATGCAGATG TGGATGCTTG A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146279313	ENSMUSSNP3518616	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51765274					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:49362845 () rs orientation: forward

Symbol	Name	Function Class
Card19	caspase recruitment domain family, member 19	within coordinates
Tssr122463	transcription start site region 122463	1316 bp upstream
Tssr122464	transcription start site region 122464	1300 bp upstream
Tssr122465	transcription start site region 122465	916 bp downstream