rs51772693 SNP Detail

Summary

• ID
  rs51772693
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:54570581 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATATGTGTA TGTGTATATA
  TATATATATA TATATGTGTG TGTGTGTGTG TGTGTGTGTG TGTCTGTGTG TCTGTGTGTC
  TGTGTGTCTG TGTGTGTATC CTGACATCTG CCAGAGGAGG GAGATGGAAA GTCAAGTGTA
  AGTTAAGTAT GAGGGTCAGA GAAACAGTGA GTGGTGAAGC AAGCATATTT AGGTTTTTGC
  Y
  TGGCATCTGA AAAACAGACC AGGAGAAGGA AAAAGAAAAA TGGCTGTGGA TCTGAATTCA
  TAAGGTTCTA TGGGGTTCCT GCAAGCTCTA CTGCCACCAG TGGAATGAAC CACAAGCAGT
  AAGAAGAAAA CCTACCTCAA CATGACTTAG TTAGCTGGGC TGGTTCAACC TTCTAGAGTC
  CGACCCTAAG CAGTTTATTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss136506944	ENSMUSSNP1645912	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs51772693					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:54570581 () rs orientation: forward

Symbol	Name	Function Class
Acsbg1	acyl-CoA synthetase bubblegum family member 1	1427 bp upstream
Gm39341	predicted gene, 39341	1051 bp downstream
Rr204171	regulatory region 204171	1010 bp proximal
Rr206444	regulatory region 206444	1380 bp distal
Tssr89653	transcription start site region 89653	1581 bp upstream
Tssr89654	transcription start site region 89654	1442 bp upstream
Tssr89655	transcription start site region 89655	1385 bp upstream