rs51775570 SNP Detail

Summary

• ID
  rs51775570
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32903940 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGGACCTC TGCTCTAGTG
  AGCTCACAGA CGCTGCAGTG AACCCAAGAT AACACCAAGC TCAAGATAAC CAACATTCCA
  GCACTGGGGA AGGGATGGTG AGCCCTAGCC CCTAGTTGAG GAGTTATTGG CAGCTGATGG
  TGGTGGGAGA GTCAGCTTTC TCTGAGGGTC TGATCACTGG TAAGCCTTTT GTCCCTGATA
  K
  GCACTACACC TATTTGAATC AGTAAGTTAT TTAAAAAAAA AAAAAAGGGA GGGGTGTGGG
  TAAGGAGCCA ATCTGGAAGG AATTAAGCGG GAGAGTAGGA GGCAAGTCTG ATCAAAACAC
  ATTTTATGCA TAAAATTCTC AACAACAAAT TAATAAAATA TTGTGTATTT AAAAAAAAAA
  AAAGGTACAT GCTGTGAGTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss145473620	ENSMUSSNP2662055	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss325362843	CHEV_17_32821911	CHEVERUD	SCREENING_POP	f	SNP		T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs51775570					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32903940 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	665 bp upstream
Rr339615	regulatory region 339615	660 bp proximal
Tssr143733	transcription start site region 143733	619 bp upstream
Tssr143734	transcription start site region 143734	644 bp upstream
Tssr143735	transcription start site region 143735	673 bp upstream
Tssr143736	transcription start site region 143736	689 bp upstream
Tssr143737	transcription start site region 143737	1127 bp upstream