rs51777759 SNP Detail

Summary

• ID
  rs51777759
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:76043330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACATGGCTG TACGAAAGCC
  AGCTCACAGG GGCTGTTCTC AAATATGGCT TTGTTCTGGG GTTTCTTCAG TTAGTTTTTT
  TCTCCTAACA AAAAAGTCAC TTCGAACAAA ACAATATCAA ATGGTGTGTC ATAGTTAGCA
  AAGGTCAAAT ACACATTTTC TTGGTACTGT CCATGGGAAT AATGCCATTT TCAGAAATGT
  Y
  CCCGTCCTAC GCACCTACTG CATTCTAAAA AAAAAAAGTC AGGGGACTGG GACTGGAGAG
  AGGGCTCAGC AATCACTGAG CCCTGGACCC AGAAGACCGG GGTTCAATTC CGAGCACCTA
  CATGGCAGCT CACAACTCTG TAACTCTAGT TTCTGGAGAT CCATTTCTGG AGATCCAAAA
  CCCTTACACA GACACACATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss63566405	NES16968256	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs51777759					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63566405	NES16968256	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:76043330 () rs orientation: forward

Symbol	Name	Function Class
Rr390932	regulatory region 390932	within coordinates