rs51780534 SNP Detail

Summary

• ID
  rs51780534
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:113811140 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGGAATGT TATTCTGATA
  TACCTCATCA TACCCAGCCT CTGCAATTGT TTAGAGAAGT GTTATAAAAT TTAACATAAT
  AACTATTATT AGAATAAATC ATTCTGAATG ATACCTCTTT TGCCATATAA AATAGCAAAA
  CAGTGGGAAT AATACTGATG GTGTCCCTTT AAAATTCTTC CTGCCATAGA CAGGTAGTAT
  Y
  CTGCCATCCA AGGATTACAT AATCTTTCCA CATGCAAAAT GTTTTAAGTT TTCCTGAGGC
  TCATCCCATT GCAGTTTTAG TTACAAGTAA ATGATTTCAA CTATATCCAC AGAGATTAAA
  ATCATACAAA CTTATCGTCT TAATAATCTA AGTAAAATGC AGATGAGACT TTTCAATGCA
  GTCCTTTCTG TACCAATTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146910283	ENSMUSSNP975643	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51780534					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:113811140 () rs orientation: forward

Symbol	Name	Function Class
Tssr4518	transcription start site region 4518	819 bp upstream