rs51791502 SNP Detail

Summary

• ID
  rs51791502
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:104255490 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGACT TTTACTGCTC TCTTTTCTCT
  C
  CCATGCTTTA AAAGCCAGGG TGCCA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148950941	ENSMUSSNP5428704	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss321633668	CHEV_5_104536643	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51791502					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:104255490 () rs orientation: forward

Symbol	Name	Function Class
Gm26703	predicted gene, 26703	1593 bp upstream
Rr123937	regulatory region 123937	1110 bp proximal
Rr378391	regulatory region 378391	within coordinates
Sparcl1	SPARC-like 1	within coordinates
Tssr1563	transcription start site region 1563	856 bp upstream