rs51793768 SNP Detail

Summary

• ID
  rs51793768
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:58737282 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGATATTACC TTTTTGAGGA AAAGTTCTAT ATGGTTTTAT
  GTGTATGATA TAAAATATAA ACTGGCCAAA TTGGGGCTAA GTGTGTATGC TAATGGGAAA
  C
  CTTTAATATC ATCAAATCCC AGGAAAATGC AAATTAAAAC CACAATAAGA TGCCACTTGT
  ATGAGTGATC CTATCAGAAC AGTAACAGAA AAGTTGACA                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss132214988	ENSMUSSNP5179299	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss323694267	CHEV_11_58659958	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51793768					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:58737282 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2935	CpG island 2935	573 bp proximal
Gm12258	predicted gene 12258	702 bp upstream
Rr246822	regulatory region 246822	318 bp proximal
Rr402593	regulatory region 402593	435 bp upstream
Tssr101753	transcription start site region 101753	697 bp upstream