rs51795068 SNP Detail

Summary

• ID
  rs51795068
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:90906726 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCA ATGTGGCAAT GTGGTCCTGC
  W
  TGGGTGGGTG GGTGGGGAGC CAAAC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321608238	CHEV_5_91187893	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs51795068					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:90906726 () rs orientation: forward

Symbol	Name	Function Class
Cpgi16042	CpG island 16042	476 bp proximal
Cxcl5	C-X-C motif chemokine ligand 5	493 bp upstream
Gm72413	predicted gene, 72413	within coordinates
Rr614399	regulatory region 614399	278 bp distal
Rr614400	regulatory region 614400	84 bp proximal
Tssr47178	transcription start site region 47178	482 bp upstream