rs51798120 SNP Detail

Summary

• ID
  rs51798120
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:27297520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGGT ACTCAGCTCT ATGTAGGATA
  R
  CTAAGCAATC ACACCAGCAC CAAGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146307213	ENSMUSSNP2506954	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
ss325786798	CHEV_19_27394610	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51798120					SNP	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:27297520 () rs orientation: forward

Symbol	Name	Function Class
Gm35268	predicted gene, 35268	within coordinates
Gm50114	predicted gene, 50114	within coordinates
Tssr155737	transcription start site region 155737	1639 bp upstream