rs51801650 SNP Detail

Summary

• ID
  rs51801650
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:72156838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCATG GTGCACGGAC CGCATGGTGC
  M
  CGCACCATCA CTGCTGCATG TTGTT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145153488	ENSMUSSNP4627716	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51801650					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:72156838 () rs orientation: forward

Symbol	Name	Function Class
Gm18860	predicted gene, 18860	11 bp downstream
Rr665158	regulatory region 665158	1915 bp distal
Rr665160	regulatory region 665160	1984 bp distal
Rr665161	regulatory region 665161	894 bp distal
Rr665162	regulatory region 665162	468 bp distal
Tssr81752	transcription start site region 81752	1560 bp upstream