rs51801987 SNP Detail

Summary

• ID
  rs51801987
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:150968966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAATCTTT TATGTTTTTA
  GCTATTTATC TGTACTTCAG AACTTACTCG GCCATACTGT AGGATCTTTA AACCTCGTTT
  TCTCTACTAT ATTGCCAATA TTCAATTTTC TCTCATGTAT AAACAAATTC CCTTCTTCCT
  AGAACCTAAA CAACTGTGCA ATTGACACAC CTGGAATTCT GGATAACCTT GGAATACAAA
  W
  GGGGACACGA ACCTCCTCCA CTGGGAAAAC TGAAGCTCAC TGTGTTGTGT GCTCACTGCA
  AACTCAAGTT GGACTGTCTT TCTACCCGAA ATGATGACTT TATTCTTTCC TGTATTGCAT
  GTAGGTAGGA GAAAGGGGCC TTCCATGTCT TTCTACCTGA AATGATGACT TTATTCTTTC
  CTGTATTGCA TGTAGGTAGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147954209	ENSMUSSNP2641582	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51801987					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:150968966 () rs orientation: forward

Symbol	Name	Function Class
Gm30478	predicted gene, 30478	418 bp upstream
Tssr20714	transcription start site region 20714	413 bp upstream
Tssr20715	transcription start site region 20715	434 bp upstream