rs51802158 SNP Detail

Summary

• ID
  rs51802158
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:3557487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCACATCTC TAGAAGACTC
  CTTCAGTCTC TGATGTTTGC ACTCACTGTG AATAGTCAGG ATCTCTTCCA CCTTCCGTCT
  CTGTCTGCCT GAGCCTCCTC ATCTATAAAA CTAGAGCAGT GATCCTCAAC CTTCCTAACG
  CTGCGACCCT TTAATACAGT TCCTAGTATT GTGATGACCC CAGCCATAAA ATTATTTTCA
  Y
  TGTCCTCTGT AACTATAATT TGGTTACGAC TATGAACTCT AAGGTAAACA TCTTTGTTTT
  CCAATGGCCT CAGGCAATCC ACAGGTTAAG AAGCACTGTA TTAGAATATT ACTCATGTCA
  TTTCCTTACC ATGTAGAGTC CTGACACGAA CCTCAAAAGT GCTACACACT AGTTATCAGA
  CTTATAATGT GATTAGCAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145941551	ENSMUSSNP5534064	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51802158					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:3557487 () rs orientation: forward

Symbol	Name	Function Class
B230117O15Rik	RIKEN cDNA B230117O15 gene	1262 bp upstream
Tmem68	transmembrane protein 68	within coordinates