rs51804467 SNP Detail

Summary

• ID
  rs51804467
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:105281715 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTATTGCA TTATTACATT
  CCCTATTATT CCATCACGTG GTTTTTCTTC TTGCTGTAAT CCAGGACACA CCCAGAATTA
  CTGCTGACAG AAAAATCACC TGTCAACATA CCTTCATCCT AACACCATGT TGGTAATCTT
  GTCTCTGCAA AGCAGTAGCC TTTGTTTTAG CTAGAACAAA ATGACTGCCC CACTTCTAAT
  R
  GTTTTCCAAG CTTTCAGTAG AAGGGTCAAC GTTGGTGTCA CTCCTGGTTT TAAAGCCACC
  TTTAGAAGCA AAACTATCCT AGAACAGAAT GACAAACATC TTAAGCTCTT TAATTAGTTT
  TAGAGGGATT TTCGAGAAAA ACTGTAAAGA GCATCCACTC TGGTCCTTGA TGCTGTTATA
  CTGCAAAAGA GGTCTCAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145082571	ENSMUSSNP7025864	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51804467					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:105281715 () rs orientation: forward

Symbol	Name	Function Class
Cpgi626	CpG island 626	1796 bp proximal
Rnf152	ring finger protein 152	within coordinates
Rr416387	regulatory region 416387	1527 bp proximal