rs51807704 SNP Detail

Summary

• ID
  rs51807704
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:113019238 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCTGGAGCT TAAAGCAATG GTCACTAACA GCTGTGGATC
  CAGGCCTCAT GTTCCAGGGG AAAGAAGGCT TGGTTGTAGA CTACCGTTTC TGAGGGCTGC
  M
  TGTGTTAGAC AGGATCCATG CAGCTCCCTC TGCTTCATGC CATGAGGCTC TGCCGTACAT
  CTCATCCTTT TGGAGACACT CTTTCACAGG TCTCCATACA                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	NZW/LacJ	WSB/EiJ
ss61457022	NES16836228	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	A	A
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	NZW/LacJ	WSB/EiJ
rs51807704					SNP	C	C	C	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61457022	NES16836228	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:113019238 () rs orientation: forward

Symbol	Name	Function Class
Gm4657	predicted gene 4657	355 bp upstream
Rr383929	regulatory region 383929	746 bp upstream
Rr687465	regulatory region 687465	1026 bp proximal