rs51808147 SNP Detail

Summary

• ID
  rs51808147
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:129954190 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCTTGATC TACTTGGACT
  TGAGCTCTGT ACAAAGAGAT AAGAATGGAT CGATTTGCAT TCTGCATGTT AACTGCCAGT
  TGAACTAGTA CCATTTGTTG AAAATGCTGT CTTTTTACCA CTGTATGATT TTAGCTCCTT
  TGTGAAAGAT CAAGTGATCA TAGGTGTTGG GTTCACTTTT GGGTCTTTAG TTCTATTCCA
  W
  TGATCTACCT GCCTGTCTCT GTACTAATAC CATGCAGTTT AACTTGAGGT CAAGGATGGT
  GATTTCACCA GAAGTTCTTT TATTGTTTAG AATAGTTTTC ACTATCCTGG GTTTTGTTAT
  TCCAGATGAA TTTGCAAATT GTTCTTTCTA ACTCTATGAA GAATTGAGTT GGAATTTTGA
  TGGGGATTGC ATTGAATCTA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss147743290	ENSMUSSNP6131822	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		T
ss323544178	CHEV_10_129555377	CHEVERUD	SCREENING_POP	f	SNP			T		T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs51808147					SNP	A	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:129954190 () rs orientation: forward

Symbol	Name	Function Class
Gm5181	predicted gene 5181	1918 bp upstream
Rr385500	regulatory region 385500	168 bp downstream