rs51808785 SNP Detail

Summary

• ID
  rs51808785
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33150869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGTTCTGT GGAAGCCTGG
  ATGTTTGTTA TGGGTCGTGA CACAATTGCT GATTCATGTT TGGTATCCTG ACCCTACCCA
  AACAGGACTG CTGGCATCCT GAGGATTGGA GACTAAACTC ACCCCAAGGA ACTACTTCTA
  AACAGCATAC AGCAGAGCCC CAAGGCTTCT TCTGGATCAA CCTGCCATTG CTGCTTCATG
  M
  ATGGTGTTTG GAGTGGATTG AGCTGCTGCT GCTGAGTGTG ACCTGAGCTG CTGATATCCT
  GACAATGCAG ATTGTTAAAT CTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCTAT
  CTATCTATCT ATCTATCATC TACCTACCCA TCCACCCATC CTTCCATCCA TTCATTCATC
  ATCCATCCAT CATCTATCTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137582055	ENSMUSSNP1065028	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51808785					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33150869 () rs orientation: forward

Symbol	Name	Function Class
Gm59430	predicted gene, 59430	1843 bp upstream
Rr464869	regulatory region 464869	1353 bp proximal
Rr464870	regulatory region 464870	1854 bp proximal