rs51811575 SNP Detail

Summary

• ID
  rs51811575
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:113609841 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCTCTTCC AGAGGTCCTG
  AGCTCAAGTC CCAGCAACCA CATGGTGGCT CTCAACCATC TACAGTGGGA TCTGATACCC
  TCTTCTGGTG TGTCTGAAGA CAGTGACAGT GTACTCATGT ACATAAAATA ATTAAAAAAA
  AACAAACCCA AAACCCAAAC TAATTGGGTG AAGAGGGAGC TCACAGAATT GGAGAAAATC
  R
  TTGCCAGTTA TAAATCTGAC AGAATATTAA TATTCAGAAT ACATAAAAAA CTCAAAAAGC
  AGTGAGTCAA AACAAGCAAA CAAATGACCC ATTGAAGGAT GCCACCTTCG ACCTGAGCAG
  GGGTTCTCAG AAGAAGAAAA CGAAAGGCTA AGGGATATCT CAGAAATGTC CATCTACCTT
  AGTAGCTAGG GTTACAAATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss136989665	ENSMUSSNP1941427	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51811575					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:113609841 () rs orientation: forward

Symbol	Name	Function Class
Clasp2	CLIP associating protein 2	within coordinates
Rr192898	regulatory region 192898	960 bp proximal
Rr202689	regulatory region 202689	1748 bp proximal