rs51818976 SNP Detail

Summary

• ID
  rs51818976
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134069823 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGTC TGTAACTCCA ACAGCCCTAT
  G
  GTGGGGCACC GCCCCAGCAA GGGGG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147525914	ENSMUSSNP4312778	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321346949	CHEV_4_133898427	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51818976					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134069823 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15035	CpG island 15035	410 bp proximal
Rr601645	regulatory region 601645	179 bp proximal
Slc30a2	solute carrier family 30 (zinc transporter), member 2	669 bp upstream
Tssr39548	transcription start site region 39548	631 bp upstream
Tssr39549	transcription start site region 39549	686 bp upstream
Tssr39550	transcription start site region 39550	981 bp upstream
Tssr39551	transcription start site region 39551	1011 bp upstream
Tssr39552	transcription start site region 39552	1086 bp upstream
Tssr39553	transcription start site region 39553	1120 bp upstream
Tssr39554	transcription start site region 39554	1171 bp upstream
Tssr39555	transcription start site region 39555	1370 bp upstream
Tssr39556	transcription start site region 39556	1490 bp upstream