rs51824373 SNP Detail

Summary

• ID
  rs51824373
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:36984978 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCTATGGG CCATTTCCAA
  ACAGCTGAGG CAACTCATTC CATAATGTGG AAGAAGTCTT ATGAAGCAAC TTGATTTTAA
  AATGAGAAGT AATGAAAACA GCCTTCATAA TCTTGATTAA TCATCCCTGA ATAGATTCAA
  CTGACTATTT CCACTGGATA TCTAGAACTT GAAGATAAGG GAGTAAAAAG GATGACAAGA
  W
  TTCTATAAGT ATTGAGAAAT CCCAAAAACG TTTTTGTTAT GCATATCAAT CCAGAACAAT
  TACTTTTCAA TAAAGTAACC CACGATCTCC TTCAATGTGT TGTGTGACGC TGGATTAGAG
  TGACCTTTGA AAGGTGGAAT TGGGTGGAAT GCATTTGTGT GTGTGTTGTG TGTTAGTGTG
  TGTGTATGTT AGTGTGTGTA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss61769433	NES17696868	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	T	A	T	A	T	T	A	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs51824373					SNP	A	A	A	T	A	T	A	T	T	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61769433	NES17696868	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:36984978 () rs orientation: forward

Symbol	Name	Function Class
Rr388271	regulatory region 388271	1379 bp downstream