rs51829831 SNP Detail

Summary

• ID
  rs51829831
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:28584769 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAAGAAAC TGCCATTCAA
  GCTTGCCTAT AGCACAACCT TACAGATGCA TTTTCTCAGT CAAGAGGCAT CCACCTCCCA
  GATAATTCTA GCTTATATCA AGTTGGCATA AAACTTGACA GGATCTACCT CAAGTTTTTC
  TCTCCCCATC CTGTAACACA TTGGTCTTCC TCCTTTAAAG AAATGTTAGC TTATACAGAT
  K
  AAATAGCTAA CTACAGCAAC CACCTGTACG GTATCGTCCT CGTTGACGAA GAGGCACTCG
  GCCTTTCTAA CAGAGGTTGT GGGCTTTTCT CAGTTGAACA GAATTGTGTT TGAGAAGCAC
  ATTGAAAAGG ATGATGCATT CTGAGAGGAT GCATTACTGT GCATTTGGAA ACCCATTTCC
  ATATTGATGC ACGCGCCAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60202639	NES15705721	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51829831					SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60202639	NES15705721	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:28584769 () rs orientation: forward

Symbol	Name	Function Class
Rr391539	regulatory region 391539	1511 bp upstream