rs51831247 SNP Detail

Summary

• ID
  rs51831247
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:59241004 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTGGTTGG GCAGCCTCTG
  ACTGGGCGGG ACCATCAAGC TCCCCAACTG CTTATGGGAG GAGTGTCTTG AGACTGTGAT
  CCCAGCTACT GGAGAGACTG AGACAGGTCA GCCTGGCTAC GCAGTGAGAC CCTCAAGATC
  CCTCTCAGCC CATTTCCTCC TAAAGGATGC TCTAAACATA AATCTTTTTA AAAAAATTTT
  W
  AAATCAACAA AAATAATAGT GGCTACTTAT GGAGAAGCCT GGTGGTTTCA TCCATGATGG
  AAAGGTTCGA TGCATTGGCC ACGCCTCCCA CAGACTTTCC TTTTATTCGT GGTGGGAGTG
  TTAAAAGTCT GTGCTCTGGG GGGTTTGAGA TTGGGTTACC TTTCTCACTG CACGTTTGCT
  AGAAATGATT TAAGGAAGGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ
ss52330496	NES15283261	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ
rs51831247					SNP	T	T	T	T	T	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52330496	NES15283261	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:59241004 () rs orientation: forward

Symbol	Name	Function Class
Pla2g12b	phospholipase A2, group XIIB	within coordinates
Tssr93483	transcription start site region 93483	1749 bp downstream
Tssr93484	transcription start site region 93484	1513 bp downstream
Tssr93485	transcription start site region 93485	1495 bp downstream