rs51835732 SNP Detail

Summary

• ID
  rs51835732
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34924131 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTTTGCTC AACAAATGGC
  TCAATGCCCT GGGCTCTGTT CTGATGCTGG AGGCGCTGCC ACAAAGCAGG AATCTGCTGT
  GTGCTGTAGG TTGTTTGAAG AGGCAAAAGC TAAATAAGCT GTGCTTTGTC GAATAGGAAC
  AGTGTGAGAA GAAAGAAGGA AACTGGGATG TGAGGCCGGG AGTCAGGGCT CCAGCCTGCC
  R
  TGGCTGGTAA GTGGCTGAGC TCTTTGGGAT CCCTGCGGCA GGTTTGGACA GGAGAGATCT
  CTGAGCTCAG CTCAGATCAC CCGAATAGAA TCCCCAGGGA CTGGACTGGA TTAAGATCAT
  CAATTCAATT CTGATCCCAG TAGGAGTGGA GGCCCCAGGA TAGTGCAGAG AGCACAGCTC
  TGTCAGTGGG CATCGCAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss149109367	ENSMUSSNP3307459	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss322578206	CHEV_8_35520031	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51835732					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34924131 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20247	CpG island 20247	1275 bp distal
Gm39159	predicted gene, 39159	1141 bp downstream
Gm45349	predicted gene 45349	within coordinates
Gm46038	predicted gene, 46038	within coordinates
Rr400818	regulatory region 400818	1348 bp downstream
Rr662016	regulatory region 662016	1192 bp distal