TGGTT GGTCCCTAAG ACAACAGAAG T CTCTAAAGCC ACCTTTGTCC CCAGT T = T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss145056197 | ENSMUSSNP3208797 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | T | ||
ss324500813 | CHEV_13_99461657 | CHEVERUD | SCREENING_POP | f | SNP | T | T | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs51842772 | SNP | T | T | T | T |
Location: Chr13:98828210 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr281821 | regulatory region 281821 | 1590 bp proximal | ||||||
Tmem171 | transmembrane protein 171 | within coordinates | ||||||
Tssr120815 | transcription start site region 120815 | 602 bp upstream | ||||||
Tssr123632 | transcription start site region 123632 | 449 bp downstream | ||||||
Tssr123633 | transcription start site region 123633 | 493 bp downstream | ||||||
Tssr123634 | transcription start site region 123634 | 1013 bp downstream | ||||||
Tssr123635 | transcription start site region 123635 | 1023 bp downstream | ||||||
Tssr123636 | transcription start site region 123636 | 1057 bp downstream | ||||||
Tssr123637 | transcription start site region 123637 | 1087 bp downstream | ||||||
Tssr123638 | transcription start site region 123638 | 1417 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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