rs51845201 SNP Detail

Summary

• ID
  rs51845201
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:82578764 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTAATATTA GTTTCACTAT
  TGTAATGCCA TAATGAATTA ATTGTTCTAA AACTGAACAG TTGGCTGGTT TTTGTTCCAA
  GCATAGAATT CAAATTTGTT AGCTCTTTAA TGTAAAAATT TGAGAGTACC TTAGTCTTCA
  TACCTTCATT GTTTTTGCAT ATTTAAGTTT TGGTGTTAGT ATGTGTCTAG ATGTACAATA
  Y
  ATGTATGGCT AGTACAGTTG CCACATTCAT TTGAAACAGC TGTTACTTTT GTTGTTGTTG
  TTGTTGTTGC TTTGTTTGTT TGTTTGTTTT GAGACAGGGT TTCTCCATAT AGCCCTGGCT
  GACCTGGAAC TCACTTTGTA GATCAAGCTG GACTGGAACT CAGAAATCCG CCTGCCTCTG
  CCTCCCAAAT GCTGGGATTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss63339918	NES17514625	PERLEGEN	MM_PANEL2	f	SNP	T	C	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs51845201					SNP	T	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63339918	NES17514625	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:82578764 () rs orientation: forward

Symbol	Name	Function Class
Dmd	dystrophin, muscular dystrophy	within coordinates
Gm22580	predicted gene, 22580	873 bp upstream