rs51845851 SNP Detail

Summary

• ID
  rs51845851
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:76042562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCAGGGCA CAGTACATCT
  TTCTGTAACA CTGGATATCA CCTTCCCTAA CCGCCCAGAG AATACAGAAG CCCTGGAGTC
  AGATCATGAG GGAGACAGCC AGGGGCTCCC CAGAACTTCA GGCACCACAT GTGCCCAGGT
  TGGGGCTAGT TGTTTTGTTT TGGGTTTTTG GCAATCGCGT TTGAAATATT AATGTGTCAC
  Y
  CGAGGCTTTT ACAGAACCAG GAAAATAAAC AGCAGATAAA ACACCCTTGG AAACAGAGAA
  AGGAGAAAGG TACCCCACCC TGGCAGGGCT GGGCAGTTCC CATCTGTCTG ATGTAACAAT
  TACAAGTGTT GGCAGGTCAG GGACGCCACC CTCCCCCGGA GCTTGTCTCC CCTACCAAGG
  CTTTATAATA CCCCTTTGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss63566420	NES16968251	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51845851					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63566420	NES16968251	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:76042562 () rs orientation: forward

Symbol	Name	Function Class
Rr390932	regulatory region 390932	within coordinates