rs51848834 SNP Detail

Summary

• ID
  rs51848834
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:127683212 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAGTAGATA TTAATGATTT
  TGTTCTTCAT TTTTCCTAAG TTCAAAAACT TGTGCTATGT TTTCCTTTGA TCAGAATTCT
  GATAAGCTGC AGTTGTTGCT GTAGGAAAAA ACAGGCACAA AGCAGGTCAT TTCCTCTTCC
  TGTGCCAAGA TTAAGCACAG ATGCCAATGA TGTTAAATGA AAAGAAGGAA AGCCCTTTAG
  M
  TACAAGAGAA TATTAGATTA TAGAGTAGAA AGTATATTTT CTATTACATT CATTGAAAAT
  TTATTTTATG TATGTAGTCT AATTTTCAAA TGTCTTATCA ATTCCCTTAC ATGCACACCC
  ATAACTAACG TTTTTTTGCA GATAAGTGGT TGCTATCGAA GAGCTGTGAG CCCAGAGCAG
  ACAAACCTAA AGACAGGAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss135874286	ENSMUSSNP3708083	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss320957924	CHEV_3_127592481	CHEVERUD	SCREENING_POP	f	SNP		A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs51848834					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127683212 () rs orientation: forward

Symbol	Name	Function Class
Fam241a	family with sequence similarity 241, member A	Intron
Rr584892	regulatory region 584892	within coordinates
Rr584893	regulatory region 584893	567 bp proximal
Rr584894	regulatory region 584894	1233 bp proximal