rs51852891 SNP Detail

Summary

• ID
  rs51852891
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32905912 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCTCCCGT AAGCATTCCT
  TGACCCCGTG CCTTAGATTT TGACCAAGTC TGTTCTTGCC TTTGGGTGAC TCGGTCTCAG
  TTGCTTCACT TGCAAACACC GAAGCTCACA ACATCTGTAC ACATCAGTGA CATCATACGC
  AGGGTGATGT TTGGTGAGAG CATGGGGCCT CACAGGTAGG AGTTTCTGCC CTCCTAGAGA
  R
  TTAGTGGTCC CCTCTTGTCC TGGAGTTGAC TAGTCCCTGC TCTGCAGACC TTTTGCACAG
  TTGGAACTGC AGACCTATCC AAGTTTTGTT TTCATTCTGT TGCTGTGATA AAACACTGAC
  CAAAAGTGAC CTCAGGAGGA AAAAGTTTGT TTGAGGGTAG TCAAGGTAGG AACTCCAGCA
  GGAACTTGAG ACAGAAAGCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss62679278	NES17312460	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs51852891					SNP	A	A	A	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62679278	NES17312460	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32905912 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	within coordinates
Rr337381	regulatory region 337381	1603 bp proximal
Rr339615	regulatory region 339615	within coordinates
Rr341335	regulatory region 341335	689 bp proximal
Tssr143733	transcription start site region 143733	1342 bp downstream
Tssr143734	transcription start site region 143734	1323 bp downstream
Tssr143735	transcription start site region 143735	1295 bp downstream
Tssr143736	transcription start site region 143736	1261 bp downstream
Tssr143737	transcription start site region 143737	832 bp downstream