rs51853877 SNP Detail

Summary

• ID
  rs51853877
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:83108810 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAGTGGCTA CTATTGCTGT GATAGATTCC ATATGCAAGA
  GCAACTTGGA TTGGAAAGGG TTTAATTCAG CCCTCAGTCT ATAATACATT ATGAAGAAAA
  G
  TTAGGGCAGG AACTAAAGAG AGGCTATGAA GGAAAACTGT TTACTGCCCT GTTCTCTTTA
  TCAGCTGACT TTTTTATATC ACTAAGACTA GCTGCCCAG                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145303923	ENSMUSSNP6069515	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51853877					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:83108810 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Il15	interleukin 15			Intron
				Noncoding-Transcript-Variant
Rr666117	regulatory region 666117			1174 bp proximal
Tssr81960	transcription start site region 81960			1898 bp upstream
Tssr81961	transcription start site region 81961			1860 bp upstream