rs51855103 SNP Detail

Summary

• ID
  rs51855103
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:76847474 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCAAAGAC TGTTCTTCCG
  GTTTCCTCAG TTTCCCTCTA CTATCTTTTT CTGCTCCAAG GTCCCACTCA GGGAACACGT
  GGCAGGCAAT CGACACGTCC TCAGGCCCTC CCTGGAGGCG ATGGCTTCTC ATTGATGACC
  TTGACTGTAC TGTTCCAGAA TGTTCTGCAC TGACACATGC TGGCGTCCAC TGTGTCCTTC
  Y
  GAGTCCTCTG GTGTCTTGGT TGTTGGGTAG AAAGACCACA CATGAGCACA ATTTCATTGC
  ATGTAAGAAA GCACATAGCC AGCCCAGCTC AGCACTGGGC TATAGACCTG GCTCTGCTGC
  TGAAGGTGTT TCTAGGTGCC TCAGCCTCCC TACTCATGCT ATTCTTAGCA TCTTCTTTAG
  AAGAAAATGT CTCAGCACGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52376411	NES15271937	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51855103					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52376411	NES15271937	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:76847474 () rs orientation: forward

Symbol	Name	Function Class
Gm3137	predicted gene, 3137	within coordinates
Gm10787	predicted gene 10787	355 bp upstream
Rr434365	regulatory region 434365	659 bp proximal
Tssr94202	transcription start site region 94202	344 bp upstream