rs51857114 SNP Detail

Summary

• ID
  rs51857114
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:25209013 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAATATCAA TGTAATTTTT
  TATTCTGTGT CCAATATGGG ATGGTTTAAC AGTAATTTTT GACAACCAAT TTGACTAATA
  TATACATAGT ACATTATTCT TAAAATTTCA CCCAAAAAGC AGTTATTTAT CACATGCTTT
  GGTAATACTG TTTGAGTAAT AATTTTCTGG ATAATTATTG CTTGGCTGGT AAGAGTTAAT
  R
  TAGATAATTT TTTGTTAATA TGTTGAATAT TATAAATTAT TATTGAATTG TGAGTACTGT
  AGAGATGTGT TTACAATATC ACTTTATTTT ATAGGACCGT TTACCTCTTG CTGTGGTAGG
  TAGTAATACT ATCATTGAAG TTAATGGCAA AAGAGTCAGA GGAAGGCAGT ATCCTTGGGG
  TGTGGCTGAA GGTAAGGTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss136234473	ENSMUSSNP3234333	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs51857114					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:25209013 () rs orientation: forward

Symbol	Name	Function Class
Septin7	septin 7	within coordinates
Tssr84136	transcription start site region 84136	85 bp upstream
Tssr84137	transcription start site region 84137	110 bp upstream
Tssr84138	transcription start site region 84138	158 bp upstream
Tssr84139	transcription start site region 84139	1763 bp upstream