rs51858708 SNP Detail

Summary

• ID
  rs51858708
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:92703897 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCGCGAGG ACCCCTGGGG
  CTAGCAATAC ACAGAACTCA GAGTGCTCTT TATATGAGTG AGCAATTATG AACACTTTGG
  AAATCTTTGC AAATGCCTCC CCATTTGAAA TAATTTGCTT TGAAAGAATT GTAGACTCAG
  GAGAGAGCGC AAATGTCCAA GATCCCATAT AGCCTTCTGG AGCTGTTTCC AATGGCAAAC
  R
  CATCTTACAC ATCTATACCC CACCACCAAA CCAGGACTGC AGCTTTGTGG CAATATAGTG
  GTTAAATAAA ACCTCTGTGT TTCATTAGCT CTCACTTCTG TAAATTTTTT TGTAAGATAC
  CAACTGCTTT ATGACCACAG TATCAGTTAC CTTTCTCATT GCTATGGAAG AATACTGTCA
  AGAAACAAGT ACTGGTTCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148834812	ENSMUSSNP65078	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51858708					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:92703897 () rs orientation: forward

Symbol	Name	Function Class
Fam47e	family with sequence similarity 47, member E	within coordinates
Rr114837	regulatory region 114837	1697 bp distal
Rr123707	regulatory region 123707	1827 bp distal
Rr125475	regulatory region 125475	696 bp distal
Tssr47317	transcription start site region 47317	968 bp downstream