ACTTG GGTTTGAGAT GAGAGATGGG Y CTCCTGTATG TTAAGCAATC TAACA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss61585215 | NES17539330 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | C | C | C | C | C | T | C | T | C | ||
ss137492434 | ENSMUSSNP101790 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | C | |||||||||||
ss323968688 | CHEV_12_29034104 | CHEVERUD | SCREENING_POP | f | SNP | C | C | |||||||||||
SNP Consensus Information | ||||||||||||||||||
SNP | Consensus Type | A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
||||
rs51858820 | SNP | C | C | C | C | C | C | C | C | T | C | T | C | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss61585215 | NES17539330 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr12:28399238 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm25564 | predicted gene, 25564 | 1024 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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