rs51859714 SNP Detail

Summary

• ID
  rs51859714
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161320934 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      C TGACAGGACC CTGATAGAGC TGTCTCATGT GAGGCTATGC
  CAGTGCCTGG CAAATACAGA AGTGGATGCT AACAGTCATC CACTGGACAG AGCATAGGGT
  M
  CCCAATGAAG GAGCTAGAGA AAGTACCCAA GGAGCTGAAG GGGTTTGCAG CCCCATAGGA
  GTAACATCAC TATGAACTAA CCAGTACTCC CAGAGCTCCT T                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147776227	ENSMUSSNP6393202	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51859714					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161320934 () rs orientation: reverse

Symbol	Name	Function Class
Tnfsf18	tumor necrosis factor (ligand) superfamily, member 18	1290 bp upstream
Tssr9690	transcription start site region 9690	1284 bp upstream