rs51865937 SNP Detail

Summary

• ID
  rs51865937
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:21375201 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACGGGTCAG GGGTTGGAAC
  TGATTTTTTT TTAAAATAAA TATTTAAACT TTTTGGAACT TGGAAGAAGT GAGAGAACTG
  TCTCTGTCTC TCTCTCTCTC TCTGTGATAT TTTATTTACT TCAACTTTAG CATTTCAGAG
  ACAGAATACC AATATGCTGG AACATACCAG GGCAAGCAAT GGGTAGGAAA CCCCAGAAAG
  R
  AAAGCATTGC CTTTTTACTG TAGAACTGCC TCAGATGAGC TGCCTAGCCT CACTGGGCCC
  TGTGTACTTA TCTATCAACT GTCAGGATCG AAGTACTTTG TCTTTAGAGA ATTATACAGC
  CATAAAATCC TGTAGCCTTT AATGCCTGCA AGCTTGAAAA GGGACAGATG AAGACCCCTT
  CCTTCTTTGT TTCTACATGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss146347185	ENSMUSSNP3226588	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs51865937					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:21375201 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11264	CpG island 11264	1159 bp distal
Gm13327	predicted gene 13327	1279 bp upstream
Gpr158	G protein-coupled receptor 158	Intron
Rr552705	regulatory region 552705	1189 bp distal