rs51866150 SNP Detail

Summary

• ID
  rs51866150
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:25759006 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAACT GGTAAACAGG AGAGGTTTCA
  K
  ATATTTACAG AGAAGCAATT TAAAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NOD/ShiLtJ	SM/J	WSB/EiJ
ss52193816	NES15225016	PERLEGEN	MM_PANEL2	f	SNP		G	T		G	G		G
ss147013867	ENSMUSSNP1800274	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss323277631	CHEV_10_25602914	CHEVERUD	SCREENING_POP	f	SNP				G			T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NOD/ShiLtJ	SM/J	WSB/EiJ
rs51866150					SNP	G	G	T	G	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52193816	NES15225016	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:25759006 () rs orientation: forward

Symbol	Name	Function Class
Gm47930	predicted gene, 47930	565 bp upstream
Gm66740	predicted gene, 66740	132 bp upstream
Rr218979	regulatory region 218979	6 bp distal
Rr218980	regulatory region 218980	195 bp proximal