rs51868487 SNP Detail

Summary

• ID
  rs51868487
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:51260280 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCG AGGCGATGCT AGAACCAAAC
  Y
  CTGACACTCT GCAAGAGCAG TCAGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135172815	ENSMUSSNP1641878	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss320762363	CHEV_3_51156781	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51868487					SNP	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:51260280 () rs orientation: forward

Symbol	Name	Function Class
Rr576282	regulatory region 576282	512 bp proximal
Rr576283	regulatory region 576283	694 bp proximal
Rr576284	regulatory region 576284	1353 bp proximal