rs51869821 SNP Detail

Summary

• ID
  rs51869821
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:28164406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTGGGTGGT TTATGGAAAA
  TGAAGAACTT AAGGTGGGGT CTTTTGGGGA GGGTGGGACC TATGCCTGAA GTCCAGATGG
  CAGGGACCTT CTTGGAGAGG GTCTCAGGAC CAGCAGGCAG CAGGCCTGTG GGGCTCTGAC
  AGGTAAGCAC GCTCGGAGAC AGGGCATGGC TTTTTGGAGG AGGTGGAACT TGTTCTGCAT
  R
  GTATCAAGCA GAGGAAGGGG CGGTGCTTGT CTCTGGTGAG CCACTAAGAG CCTTGGCAAG
  AGAGGAGAGC TTGCGCGGTT GGTTGCAGCG CATGCCAGTC AGGGCACACT CCACACTCTG
  GATTCCCTGA GGCTGGAAGT AGCCCAAACA GACTGTGCCA AGATACGCTC ATCAAAAGAC
  ACCTAAGTCT GGGAGGGAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148633012	ENSMUSSNP1710419	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51869821					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:28164406 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18706	CpG island 18706	1582 bp proximal
Lrfn1	leucine rich repeat and fibronectin type III domain containing 1	within coordinates
Rr644282	regulatory region 644282	within coordinates