rs51877506 SNP Detail

Summary

• ID
  rs51877506
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:82926099 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTTTGTGAT GAAAGAAGCC TGAAGAGTGA GCAGCCCGCT
  GCAAGCTTCA AGCCTGGCTC AGGGATGGAA AACACAAAGA CAAAACAAAA AGACAAAAAC
  W
  TGAAGCCAGG ATGAAGAGTT TTAGATTTTG ATACAAGCAT AGTTGAAGCC CATTGAGAGA
  TTTTAGTACT AAAGTAACTT GTTTTAGGAT GGTTCAAGTC                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss60904330	NES15955941	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	A	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs51877506					SNP	T	T	T	T	A	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60904330	NES15955941	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:82926099 () rs orientation: forward

Symbol	Name	Function Class
M1ap	meiosis 1 associated protein	within coordinates