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rs51882891 SNP Detail
Summary
  • ID
    rs51882891
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr1:153728134 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          AGTAG CTATAATTCT AAAGAAACCG
    Y
    CTCTTCCTCC ACCATCAACC TGTAA                                      
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
ss145750788 ENSMUSSNP4749166 ENSEMBL ENSEMBL_Sanger f SNP C C T
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
rs51882891 SNP C C T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr1:153728134 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Teddm2 transmembrane epididymal family member 2 1193 bp upstream
Tssr14286 transcription start site region 14286 1633 bp upstream
Tssr14287 transcription start site region 14287 1344 bp upstream
Tssr14288 transcription start site region 14288 1327 bp upstream
Tssr14289 transcription start site region 14289 1299 bp upstream
Tssr14290 transcription start site region 14290 1214 bp upstream
Tssr14291 transcription start site region 14291 1190 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory