rs51883146 SNP Detail

Summary

• ID
  rs51883146
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:140544343 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTTGTGGG AGCCACAAGT
  GTAGGAACTA AACAAGCCAG TGAACCTCTG GACAGAAGGC AGAAACATCC CGTCTACCTT
  TCCATCTAGA AAATGTGAGC TTCTTTGGGT GTGACTGGCT TCCCTGCTGA GGGGTATCTA
  GCAGCCCTTC CAGCTGCTGC CCACTGGGTA CCAAAGACAC CAGCTCACTG TGGCCATCAG
  Y
  GACGCCCAGG ATACGCATCT GCCCCACTTA GGAACTGCAG AACCAGCTGC CTCAGTATCC
  ACCTGTCCTC GTACCCACCC ACCGGGGACT CACCATGTCA GGAAAGAAGG CTTCAGCGTA
  GGCTCCCTTC AGGAAGAAGA GCTGTGGAAT GTCCACGATG TCGCTCTCGG AGAGGCCCAG
  CTCCCGCTTT AGCACCTCGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147713993	ENSMUSSNP3823670	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51883146					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140544343 () rs orientation: forward

Symbol	Name	Function Class
Gm13032	predicted gene 13032	within coordinates
Padi1	peptidyl arginine deiminase, type I	Intron
Rr603557	regulatory region 603557	within coordinates
Rr603558	regulatory region 603558	543 bp proximal